Best TWAS P=3.33e-12 · Best GWAS P=1.37e-13 conditioned to 1
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | GTEx | Artery Tibial | LACC1 | 0.16 | 0.12 | lasso | 6 | 0.11 | 5.8e-09 | 7.4 | 7.0 | 3.3e-12 | 0.98 | 0.00 | 1.00 | TRUE |
2 | GTEx | Esophagus Mucosa | LACC1 | 0.15 | 0.07 | lasso | 5 | 0.08 | 3.5e-06 | 4.9 | 5.2 | 1.6e-07 | 0.77 | 0.27 | 0.71 | FALSE |