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Depressed Affect (Nagel 2018)
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chr9:95,502,571-96,898,436
Best TWAS P=9.73e-08 · Best GWAS P=3.91e-08 conditioned to 1.24e-05
95.6M
95.8M
96M
96.2M
96.4M
96.6M
96.8M
0
2
4
6
physical position
-log10 P
Marginal
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
4
GTEx
Lung
RP11-165J3.6
0.25
0.16
lasso
7
0.17
4.1e-13
5.2
5.3
9.7e-08
-0.23
0.04
0.95
TRUE
5
GTEx
Thyroid
RP11-165J3.6
0.35
0.27
lasso
3
0.29
1.2e-22
5.2
5.2
1.5e-07
-0.25
0.05
0.95
FALSE
3
GTEx
Esophagus Gastroesophageal Junction
RP11-165J3.6
0.34
0.26
lasso
8
0.27
3.0e-10
5.2
5.2
2.0e-07
-0.22
0.04
0.96
FALSE
1
GTEx
Artery Tibial
RP11-165J3.6
0.22
0.20
lasso
2
0.19
4.9e-15
5.2
5.2
2.4e-07
-0.22
0.04
0.96
FALSE
2
GTEx
Breast Mammary Tissue (Female)
RP11-165J3.6
0.21
0.02
lasso
3
0.00
2.3e-01
5.2
5.1
2.8e-07
-0.22
0.04
0.42
FALSE