TWAS
hub
About
Usage
Models
Genes
Traits
[Hub]/) :
Traits
:
Depressed Affect (Nagel 2018)
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chr17:78,843,139-79,380,547
Best TWAS P=1.43e-07 · Best GWAS P=4e-07 conditioned to 1
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
1
The Cancer Genome Atlas
Testicular Germ Cell Tumors
AATK
0.29
0.15
lasso
4
0.11
0.00012
-5.1
-5.3
1.4e-07
0.99
0
0.98
TRUE