Best TWAS P=6.9e-08 · Best GWAS P=1.02e-13 conditioned to 1.18e-08
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | The Cancer Genome Atlas | Rectum Adenocarcinoma | FOXA1 | 0.11 | 0.03 | blup | 41 | 0.03 | 7.6e-02 | 4.5 | 5.4 | 6.9e-08 | -0.42 | 0.04 | 0.1 | TRUE |
| 2 | The Cancer Genome Atlas | Thyroid Carcinoma | MIPOL1 | 0.05 | 0.07 | lasso | 2 | 0.07 | 4.6e-07 | 5.1 | 5.1 | 2.8e-07 | -0.30 | 0.99 | 0.0 | FALSE |