TWAS
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Usage
Models
Genes
Traits
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Traits
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Blood Eosinophil Count
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chr14:37,420,572-38,311,855
Best TWAS P=6.9e-08 · Best GWAS P=1.02e-13 conditioned to 1.18e-08
37.4M
37.5M
37.6M
37.7M
37.8M
37.9M
38M
38.1M
38.2M
38.3M
0
5
10
physical position
-log10 P
Conditional
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
1
The Cancer Genome Atlas
Rectum Adenocarcinoma
FOXA1
0.11
0.03
blup
41
0.03
7.6e-02
4.5
5.4
6.9e-08
-0.42
0.04
0.1
TRUE
2
The Cancer Genome Atlas
Thyroid Carcinoma
MIPOL1
0.05
0.07
lasso
2
0.07
4.6e-07
5.1
5.1
2.8e-07
-0.30
0.99
0.0
FALSE