Best TWAS P=1.73e-08 · Best GWAS P=9.54e-16 conditioned to 7.33e-11
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | The Cancer Genome Atlas | Liver Hepatocellular Carcinoma | BIRC5 | 0.19 | -0.01 | blup | 61 | 0.01 | 0.09410 | -2.7 | 5.4 | 6.7e-08 | -0.40 | 0.01 | 0.12 | FALSE |
2 | The Cancer Genome Atlas | Soft Tissue Sarcoma | BIRC5 | 0.12 | 0.05 | blup | 61 | 0.05 | 0.00052 | -3.0 | 5.6 | 1.7e-08 | -0.34 | 0.08 | 0.14 | TRUE |