Best TWAS P=1.12e-09 · Best GWAS P=6.47e-16 conditioned to 7.57e-10
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | GTEx | Cells Transformed fibroblasts | B3GNTL1 | 0.19 | 0.00 | enet | 28 | 0.05 | 8.2e-05 | -0.38 | 5.8 | 7.0e-09 | 0.17 | 0.08 | 0.08 | FALSE |
| 2 | YFS | Blood | B3GNTL1 | 0.33 | 0.14 | bslmm | 282 | 0.23 | 1.0e-72 | 7.00 | 5.5 | 4.2e-08 | 0.37 | 0.69 | 0.31 | FALSE |
| 3 | The Cancer Genome Atlas | Stomach Adenocarcinoma | B3GNTL1 | 0.16 | 0.03 | enet | 15 | 0.09 | 5.3e-07 | 6.43 | 6.1 | 1.1e-09 | 0.40 | 0.05 | 0.50 | TRUE |