Best TWAS P=2.89e-11 · Best GWAS P=1.84e-17 conditioned to 1.08e-07
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | GTEx | Testis | PQLC2 | 0.23 | 0.14 | lasso | 7 | 0.09 | 1.1e-04 | -5.9 | -5.8 | 8.1e-09 | 0.78 | 0.51 | 0.24 | FALSE |
| 2 | GTEx | Testis | CAPZB | 0.28 | 0.09 | enet | 18 | 0.09 | 7.8e-05 | -5.9 | -6.7 | 2.9e-11 | 0.75 | 0.13 | 0.79 | TRUE |