Best TWAS P=1.64e-12 · Best GWAS P=2.28e-12 conditioned to 0.0573
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | The Cancer Genome Atlas | Kidney Renal Papillary Cell Carcinoma | MMP16 | 0.1 | 0.08 | blup | 131 | 0.05 | 1.3e-03 | -6.8 | -6.1 | 1.1e-09 | 0.79 | 0.02 | 0.97 | FALSE |
| 2 | The Cancer Genome Atlas | Thyroid Carcinoma | MMP16 | 0.1 | 0.09 | lasso | 4 | 0.08 | 2.9e-08 | -6.8 | -7.1 | 1.6e-12 | 0.85 | 0.01 | 0.99 | TRUE |