[Hub]/) : Traits : Heel T-Score :

chr11:29,646,947-31,288,160

Best TWAS P=2.26e-14 · Best GWAS P=3.85e-12 conditioned to 0.0209

Associated models

# Study Tissue Gene h2 eQTL R2 model # weights model R2 model R2 P eQTL GWAS Z TWAS Z TWAS P Top SNP corr PP3 PP4 joint
1 GTEx Colon Sigmoid ARL14EP 0.16 0.05 lasso 13 0.10 2.6e-04 2.8 -6.3 2.8e-10 0.68 0.07 0.66 FALSE
2 GTEx Esophagus Mucosa ARL14EP 0.09 0.03 enet 11 0.05 1.8e-04 2.8 -5.5 4.4e-08 0.56 0.16 0.64 FALSE
3 GTEx Spleen ARL14EP 0.34 0.19 enet 24 0.30 1.7e-08 5.4 -5.3 1.1e-07 0.42 0.36 0.34 FALSE
4 GTEx Stomach ARL14EP 0.10 0.07 lasso 3 0.04 4.0e-03 -5.7 -5.7 1.1e-08 0.38 0.62 0.12 FALSE
5 GTEx Testis MPPED2 0.18 0.17 enet 15 0.17 6.9e-08 6.4 6.0 2.7e-09 0.02 0.14 0.86 TRUE
6 GTEx Testis ARL14EP 0.43 0.36 lasso 3 0.37 1.8e-17 -6.9 -6.7 2.1e-11 0.84 0.01 0.99 FALSE
7 GTEx Thyroid ARL14EP 0.20 0.05 lasso 6 0.09 1.0e-07 -6.5 -6.6 4.9e-11 0.79 0.01 0.99 FALSE
8 GTEx Whole Blood ARL14EP 0.07 0.05 lasso 2 0.05 3.3e-05 5.5 -5.5 2.8e-08 0.26 0.80 0.05 FALSE
9 METSIM Adipose ARL14EP 0.06 0.00 bslmm 398 0.02 2.9e-04 -6.5 -5.3 1.3e-07 0.59 0.01 0.97 FALSE
10 The Cancer Genome Atlas Breast Invasive Carcinoma C11orf46 0.05 0.05 lasso 5 0.06 6.2e-12 5.5 -5.2 1.5e-07 0.25 0.96 0.04 FALSE
11 The Cancer Genome Atlas Kidney Renal Clear Cell Carcinoma C11orf46 0.36 0.27 lasso 5 0.30 8.3e-34 5.4 -5.3 1.1e-07 0.30 0.98 0.02 FALSE
12 The Cancer Genome Atlas Kidney Renal Papillary Cell Carcinoma C11orf46 0.13 0.12 lasso 3 0.11 8.9e-07 5.4 -5.4 8.4e-08 0.26 0.94 0.03 FALSE
13 The Cancer Genome Atlas Brain Lower Grade Glioma C11orf46 0.02 0.02 lasso 2 0.02 5.9e-03 -6.8 -6.8 8.6e-12 0.99 0.00 0.78 FALSE
14 The Cancer Genome Atlas Liver Hepatocellular Carcinoma C11orf46 0.12 0.07 blup 34 0.07 4.4e-04 5.4 -6.8 7.6e-12 0.68 0.05 0.35 FALSE
15 The Cancer Genome Atlas Lung Adenocarcinoma C11orf46 0.09 0.11 lasso 4 0.10 1.2e-11 5.4 -5.6 2.7e-08 0.29 0.98 0.02 FALSE
16 The Cancer Genome Atlas Pancreatic Adenocarcinoma C11orf46 0.22 0.22 lasso 3 0.20 1.1e-08 5.4 -5.4 7.0e-08 0.26 0.97 0.02 FALSE
17 The Cancer Genome Atlas Prostate Adenocarcinoma C11orf46 0.09 0.07 lasso 2 0.06 2.4e-07 5.4 -5.4 8.0e-08 0.26 0.95 0.02 FALSE
18 The Cancer Genome Atlas Thyroid Carcinoma C11orf46 0.12 0.06 blup 34 0.10 1.4e-09 5.4 -7.6 2.3e-14 0.71 0.69 0.31 TRUE