Best TWAS P=3.31e-09 · Best GWAS P=9.65e-27 conditioned to 2.04e-22
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | GTEx | Colon Transverse | SPATA13 | 0.24 | 0.05 | lasso | 5 | 0.10 | 1.1e-05 | -5.3 | 5.2 | 2.2e-07 | 0.16 | 0.44 | 0.05 | TRUE |
| 2 | GTEx | Pancreas | C1QTNF9B-AS1 | 0.30 | 0.12 | enet | 19 | 0.12 | 1.0e-05 | 3.2 | -5.9 | 3.3e-09 | -0.04 | 0.73 | 0.02 | TRUE |