Best TWAS P=3.17e-09 · Best GWAS P=1.07e-47 conditioned to 2.28e-50
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | CommonMind | Brain Pre-frontal Cortex | MMD | 0.26 | 0.20 | lasso | 1 | 0.19 | 5.0e-23 | 5.8 | -5.8 | 6.0e-09 | 0.05 | 0.09 | 0.91 | FALSE |
| 2 | The Cancer Genome Atlas | Lung Squamous Cell Carcinoma | MMD | 0.04 | 0.01 | blup | 56 | 0.01 | 7.2e-03 | 6.6 | -5.9 | 3.2e-09 | 0.06 | 0.00 | 0.99 | TRUE |