Best TWAS P=9.04e-09 · Best GWAS P=3.09e-09 conditioned to 1
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | GTEx | Skin Sun Exposed Lower leg | TTC21B | 0.04 | 0.06 | enet | 6 | 0.05 | 5.7e-05 | 5.2 | 5.5 | 3.5e-08 | 0.81 | 0.08 | 0.89 | FALSE |
2 | METSIM | Adipose | TTC21B | 0.07 | 0.03 | lasso | 3 | 0.02 | 1.2e-04 | 5.9 | 5.7 | 9.0e-09 | 0.99 | 0.00 | 1.00 | TRUE |