Best TWAS P=4.65e-14 · Best GWAS P=5.2e-13 conditioned to 1
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | GTEx | Muscle Skeletal | TANK | 0.07 | 0.06 | lasso | 2 | 0.04 | 8.9e-05 | -7.2 | 7.5 | 4.6e-14 | -0.98 | 0 | 1 | TRUE |
2 | METSIM | Adipose | AC009299.3 | 0.06 | 0.03 | lasso | 4 | 0.04 | 6.5e-07 | -7.2 | 6.3 | 3.0e-10 | -0.91 | 0 | 1 | FALSE |
3 | NTR | Blood | TANK | 0.02 | 0.02 | lasso | 3 | 0.02 | 8.7e-07 | -7.2 | 7.3 | 2.2e-13 | -0.98 | 0 | 1 | FALSE |