Best TWAS P=2.66e-08 · Best GWAS P=2.83e-10 conditioned to 0.00444
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | CommonMind | Brain Pre-frontal Cortex | SNX29 | 0.19 | 0.11 | bslmm | 890 | 0.16 | 2.1e-19 | 4.0 | 5.2 | 2.4e-07 | 0.19 | 0.99 | 0.00 | TRUE |
| 2 | The Cancer Genome Atlas | Colon Adenocarcinoma | SNX29 | 0.11 | 0.01 | blup | 447 | 0.03 | 4.3e-03 | -5.1 | 5.6 | 2.7e-08 | 0.54 | 0.05 | 0.35 | TRUE |