TWAS
hub
About
Usage
Models
Genes
Traits
[Hub]/) :
Traits
:
Blood Red Count
:
←
→
chr11:74,776,211-76,211,421
Best TWAS P=3.36e-13 · Best GWAS P=1.4e-14 conditioned to 0.000176
74.8M
75M
75.2M
75.4M
75.6M
75.8M
76M
76.2M
0
5
10
15
physical position
-log10 P
Marginal
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
3
GTEx
Whole Blood
RP11-535A19.1
0.07
0.08
enet
7
0.08
1.4e-07
7.1
-7.3
3.4e-13
-0.68
0.29
0.70
TRUE
2
GTEx
Whole Blood
DGAT2
0.10
0.09
enet
5
0.09
1.6e-08
7.1
-7.1
1.5e-12
-0.69
0.32
0.68
FALSE
4
ROSMAP
Brain Pre-frontal Cortex
DGAT2
0.05
0.04
blup
450
0.03
9.7e-05
6.3
-6.2
7.7e-10
-0.68
0.22
0.72
FALSE
5
The Cancer Genome Atlas
Kidney Renal Clear Cell Carcinoma
UVRAG
0.05
0.00
blup
144
0.01
2.4e-02
6.0
5.8
6.6e-09
0.60
0.03
0.81
FALSE
1
CommonMind
Brain Pre-frontal Cortex
DGAT2
0.05
0.02
blup
457
0.04
1.5e-05
6.0
-5.2
2.1e-07
-0.57
0.06
0.93
FALSE