TWAS
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Usage
Models
Genes
Traits
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Traits
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Blood Red Count
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chr16:14,975,292-15,369,019
Best TWAS P=9.2e-09 · Best GWAS P=3.3e-07 conditioned to 0.92
15M
15.05M
15.1M
15.15M
15.2M
15.25M
15.3M
15.35M
0
2
4
6
physical position
-log10 P
Marginal
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
1
The Cancer Genome Atlas
Breast Invasive Carcinoma
PDXDC1
0.02
0.01
blup
30
0.01
2.2e-03
-5.1
5.7
9.2e-09
-0.88
0.01
0.71
TRUE
2
The Cancer Genome Atlas
Thyroid Carcinoma
PDXDC1
0.25
0.12
enet
12
0.14
1.3e-13
4.7
5.1
2.9e-07
-0.68
0.02
0.97
FALSE