TWAS
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Genes
Traits
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Traits
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Blood Red Count
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chr16:56,847,929-58,264,412
Best TWAS P=1.38e-08 · Best GWAS P=4.66e-08 conditioned to 0.13
56.8M
57M
57.2M
57.4M
57.6M
57.8M
58M
58.2M
0
2
4
6
physical position
-log10 P
Marginal
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
1
CommonMind
Brain Pre-frontal Cortex
CCDC102A
0.16
0.09
enet
27
0.11
2.9e-13
-5.4
5.7
1.4e-08
-0.80
0
1
TRUE
2
GTEx
Muscle Skeletal
CCDC102A
0.10
0.08
enet
6
0.06
7.0e-07
-5.4
5.2
1.7e-07
-0.98
0
1
FALSE
3
The Cancer Genome Atlas
Brain Lower Grade Glioma
CCDC102A
0.05
0.05
lasso
4
0.05
2.5e-06
-5.4
5.2
1.9e-07
-0.97
0
1
FALSE