Best TWAS P=1.38e-08 · Best GWAS P=4.66e-08 conditioned to 0.13
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | CommonMind | Brain Pre-frontal Cortex | CCDC102A | 0.16 | 0.09 | enet | 27 | 0.11 | 2.9e-13 | -5.4 | 5.7 | 1.4e-08 | -0.80 | 0 | 1 | TRUE |
| 2 | GTEx | Muscle Skeletal | CCDC102A | 0.10 | 0.08 | enet | 6 | 0.06 | 7.0e-07 | -5.4 | 5.2 | 1.7e-07 | -0.98 | 0 | 1 | FALSE |
| 3 | The Cancer Genome Atlas | Brain Lower Grade Glioma | CCDC102A | 0.05 | 0.05 | lasso | 4 | 0.05 | 2.5e-06 | -5.4 | 5.2 | 1.9e-07 | -0.97 | 0 | 1 | FALSE |