TWAS
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Models
Genes
Traits
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Traits
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Blood Red Count
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chr19:29,606,361-31,013,761
Best TWAS P=6.66e-09 · Best GWAS P=5.47e-09 conditioned to 0.264
29.6M
29.8M
30M
30.2M
30.4M
30.6M
30.8M
31M
0
2
4
6
8
physical position
-log10 P
Marginal
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
1
GTEx
Skin Not Sun Exposed Suprapubic
CCNE1
0.31
0.19
lasso
9
0.21
6.3e-12
5.8
5.8
6.7e-09
0.94
0
1.00
TRUE
2
GTEx
Skin Sun Exposed Lower leg
CCNE1
0.27
0.22
lasso
8
0.24
2.5e-19
5.6
5.5
3.7e-08
0.93
0
1.00
FALSE
3
The Cancer Genome Atlas
Bladder Urothelial Carcinoma
CCNE1
0.03
0.02
blup
39
0.02
4.5e-03
5.6
5.3
1.3e-07
0.90
0
0.97
FALSE