TWAS
hub
About
Usage
Models
Genes
Traits
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Traits
:
Blood Red Count
:
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chr3:37,090,274-38,601,556
Best TWAS P=9.37e-13 · Best GWAS P=1.92e-16 conditioned to 0.00133
37.2M
37.4M
37.6M
37.8M
38M
38.2M
38.4M
38.6M
0
5
10
15
physical position
-log10 P
Marginal
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
1
ROSMAP
Brain Pre-frontal Cortex
AC093415.2
0.05
0.02
lasso
4
0.02
3.0e-04
7.69
7.1
9.4e-13
0.66
0.03
0.93
TRUE
2
The Cancer Genome Atlas
Breast Invasive Carcinoma
CTDSPL
0.07
0.00
enet
13
0.02
1.1e-05
-0.93
6.4
2.0e-10
0.49
0.00
0.72
TRUE