Best TWAS P=5.04e-09 · Best GWAS P=1.05e-08 conditioned to 0.193
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | GTEx | Thyroid | RP5-1148A21.3 | 0.08 | 0.07 | enet | 9 | 0.06 | 1.7e-05 | -5.1 | -5.2 | 1.9e-07 | 0.84 | 0.06 | 0.93 | FALSE |
| 2 | The Cancer Genome Atlas | Thyroid Carcinoma | PTP4A1 | 0.05 | 0.00 | blup | 34 | 0.03 | 1.0e-03 | -3.5 | -5.8 | 5.0e-09 | 0.87 | 0.02 | 0.74 | TRUE |