[Hub]/) : Traits : Schizophrenia (2018) :

chr2:200,086,752-201,571,143

Best TWAS P=2.36e-12 · Best GWAS P=2.11e-10 conditioned to 0.0737

Associated models

# Study Tissue Gene h2 eQTL R2 model # weights model R2 model R2 P eQTL GWAS Z TWAS Z TWAS P Top SNP corr PP3 PP4 joint
1 CommonMind Brain Pre-frontal Cortex C2orf47 0.05 0.02 blup 361 0.02 4.3e-03 6.2 -7.0 2.4e-12 -0.73 0.02 0.98 TRUE
2 GTEx Brain Caudate basal ganglia TYW5 0.23 0.11 lasso 3 0.11 5.4e-04 4.5 -5.5 3.9e-08 -0.52 0.07 0.32 FALSE
3 GTEx Testis C2orf69 0.14 0.09 enet 17 0.10 2.7e-05 6.2 6.4 1.7e-10 0.71 0.03 0.96 FALSE
4 GTEx Whole Blood C2orf47 0.04 0.05 lasso 2 0.03 3.6e-04 6.3 6.3 4.0e-10 0.69 0.02 0.97 FALSE
5 The Cancer Genome Atlas Colon Adenocarcinoma C2orf60 0.08 0.06 enet 11 0.06 1.4e-04 6.3 -5.7 9.4e-09 -0.64 0.01 0.94 FALSE
6 The Cancer Genome Atlas Head and Neck Squamous Cell Carcinoma C2orf69 0.02 0.00 blup 35 0.01 2.6e-02 3.4 5.4 5.4e-08 0.59 0.02 0.76 FALSE
7 The Cancer Genome Atlas Testicular Germ Cell Tumors C2orf47 0.15 0.05 blup 39 0.05 7.6e-03 6.1 -5.4 5.5e-08 -0.64 0.01 0.97 FALSE
8 The Cancer Genome Atlas Testicular Germ Cell Tumors C2orf60 0.15 0.05 enet 12 0.08 8.2e-04 6.2 -5.3 9.3e-08 -0.59 0.01 0.98 FALSE