Best TWAS P=2.71e-10 · Best GWAS P=9.28e-10 conditioned to 0.157
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | GTEx | Artery Tibial | TNS3 | 0.19 | 0.03 | enet | 36 | 0.07 | 2.4e-06 | -4.5 | -6.3 | 2.7e-10 | -0.55 | 0.09 | 0.87 | TRUE |
2 | The Cancer Genome Atlas | Lung Adenocarcinoma | TNS3 | 0.09 | 0.00 | blup | 199 | 0.03 | 8.3e-05 | 4.3 | -5.6 | 2.5e-08 | -0.50 | 0.01 | 0.78 | TRUE |