Best TWAS P=6.52e-08 · Best GWAS P=6.05e-07 conditioned to 2.09e-05
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | CommonMind | Brain Pre-frontal Cortex | GABPB2 | 0.05 | 0.01 | blup | 324 | 0.01 | 0.016 | -0.44 | 5.4 | 6.5e-08 | -0.14 | 0.04 | 0.14 | TRUE |
| 2 | GTEx | Brain Cortex | CTSS | 0.17 | 0.06 | lasso | 6 | 0.04 | 0.027 | -4.13 | -5.3 | 8.7e-08 | 0.23 | 0.02 | 0.42 | FALSE |