Best TWAS P=8.41e-11 · Best GWAS P=3.89e-14 conditioned to 9.23e-05
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | CommonMind | Brain Pre-frontal Cortex | JPH2 | 0.07 | 0.05 | lasso | 3 | 0.04 | 3.6e-06 | 6.3 | 6.5 | 8.4e-11 | 0.58 | 0.04 | 0.94 | TRUE |
| 2 | The Cancer Genome Atlas | Brain Lower Grade Glioma | JPH2 | 0.08 | 0.01 | blup | 127 | 0.06 | 1.6e-07 | 3.7 | 5.9 | 4.6e-09 | 0.28 | 0.21 | 0.16 | TRUE |