Best TWAS P=3.77e-14 · Best GWAS P=9.46e-82 conditioned to 6.48e-66
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | CommonMind | Brain Pre-frontal Cortex | NPR3 | 0.07 | 0.02 | bslmm | 470 | 0.02 | 2.2e-03 | 13.1 | -7.6 | 3.8e-14 | 0.36 | 0.07 | 0.60 | TRUE |
| 2 | GTEx | Brain Hippocampus | CTD-2203K17.1 | 0.24 | 0.16 | enet | 34 | 0.16 | 1.8e-04 | 4.5 | 6.0 | 1.9e-09 | -0.08 | 0.12 | 0.05 | TRUE |
| 3 | GTEx | Cells Transformed fibroblasts | CTD-2203K17.1 | 0.38 | 0.36 | enet | 13 | 0.36 | 3.7e-28 | -4.5 | 5.3 | 1.4e-07 | -0.08 | 1.00 | 0.00 | FALSE |