Best TWAS P=1.43e-07 · Best GWAS P=3.16e-07 conditioned to 0.57
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | The Cancer Genome Atlas | Brain Lower Grade Glioma | FLJ10661 | 0.21 | 0.26 | lasso | 9 | 0.30 | 2.3e-34 | 5.1 | -5.3 | 1.4e-07 | -0.93 | 0.00 | 0.99 | TRUE |
| 2 | The Cancer Genome Atlas | Liver Hepatocellular Carcinoma | FLJ10661 | 0.09 | 0.07 | blup | 41 | 0.07 | 3.6e-04 | -4.1 | 5.2 | 2.1e-07 | 0.83 | 0.04 | 0.57 | FALSE |