[Hub]/) : Traits : Schizophrenia (2014) : ← →

chr7:109,603,832-111,895,681

Best TWAS P=7.35e-11 · Best GWAS P=3.96e-12 conditioned to 0.00113

Associated models

# Study Tissue Gene h2 eQTL R2 model # weights model R2 model R2 P eQTL GWAS Z TWAS Z TWAS P Top SNP corr PP3 PP4 joint
1 GTEx Cells Transformed fibroblasts IMMP2L 0.10 0.06 enet 14 0.05 2.0e-04 6.5 -6.0 2.7e-09 0.75 0.10 0.88 FALSE
2 GTEx Colon Sigmoid IMMP2L 0.12 0.05 lasso 3 0.05 8.5e-03 6.2 6.4 1.6e-10 -0.71 0.08 0.83 FALSE
3 GTEx Colon Transverse IMMP2L 0.22 0.02 enet 14 0.02 5.4e-02 6.6 -5.8 8.8e-09 0.72 0.07 0.87 FALSE
4 GTEx Lung LRRN3 0.06 0.00 enet 11 0.01 1.1e-01 6.6 -5.8 7.2e-09 0.62 0.04 0.87 FALSE
5 GTEx Skin Sun Exposed Lower leg IMMP2L 0.06 0.06 enet 13 0.06 1.5e-05 -6.6 -6.2 6.1e-10 0.87 0.02 0.98 FALSE
6 GTEx Testis IMMP2L 0.17 0.09 lasso 3 0.11 1.8e-05 -6.0 -6.0 2.1e-09 0.85 0.06 0.93 FALSE
7 GTEx Thyroid IMMP2L 0.16 0.08 lasso 6 0.07 8.1e-06 6.4 -6.5 7.4e-11 0.72 0.08 0.92 TRUE
8 GTEx Whole Blood IMMP2L 0.06 0.06 lasso 4 0.04 1.4e-04 -5.8 -6.0 1.9e-09 0.90 0.03 0.96 FALSE
9 YFS Blood IMMP2L 0.15 0.24 enet 34 0.27 4.1e-89 6.3 -5.9 4.3e-09 0.78 0.24 0.76 FALSE
10 The Cancer Genome Atlas Breast Invasive Carcinoma IMMP2L 0.03 0.03 blup 313 0.03 3.3e-07 6.3 -5.2 1.6e-07 0.60 0.07 0.93 FALSE
11 The Cancer Genome Atlas Kidney Renal Papillary Cell Carcinoma IMMP2L 0.08 0.00 blup 313 0.03 1.0e-02 -2.6 -5.2 1.9e-07 0.73 0.21 0.54 FALSE
12 The Cancer Genome Atlas Lung Adenocarcinoma IMMP2L 0.05 0.02 blup 312 0.04 4.5e-05 -4.7 -5.7 1.5e-08 0.80 0.09 0.87 FALSE
13 The Cancer Genome Atlas Pancreatic Adenocarcinoma IMMP2L 0.09 0.05 blup 314 0.06 1.2e-03 6.2 -5.7 1.5e-08 0.74 0.05 0.84 FALSE