[Hub]/) : Traits : Schizophrenia (2014) :

chr11:45,945,837-47,632,707

Best TWAS P=1.41e-09 · Best GWAS P=6.85e-10 conditioned to 0.0305

Associated models

# Study Tissue Gene h2 eQTL R2 model # weights model R2 model R2 P eQTL GWAS Z TWAS Z TWAS P Top SNP corr PP3 PP4 joint
1 GTEx Breast Mammary Tissue ATG13 0.10 0.00 lasso 3 0.00 3.7e-01 6.2 -5.2 1.9e-07 -0.88 0.02 0.70 FALSE
2 GTEx Cells EBV-transformed lymphocytes LRP4 0.68 0.00 lasso 10 0.00 5.0e-01 -4.1 -5.9 4.2e-09 -0.67 0.03 0.16 FALSE
3 GTEx Cells EBV-transformed lymphocytes ATG13 0.13 0.07 enet 16 0.07 2.1e-03 6.0 -6.1 1.4e-09 -0.81 0.04 0.78 TRUE
4 GTEx Esophagus Muscularis ATG13 0.12 0.08 enet 16 0.04 1.2e-03 6.1 -5.9 4.8e-09 -0.93 0.03 0.96 FALSE
5 GTEx Skin Not Sun Exposed Suprapubic ATG13 0.12 0.07 lasso 5 0.06 3.3e-04 5.7 -5.2 2.2e-07 -0.94 0.04 0.95 FALSE
6 GTEx Skin Sun Exposed Lower leg ATG13 0.08 0.05 lasso 4 0.05 5.1e-05 6.2 -5.8 6.3e-09 -0.96 0.03 0.96 FALSE
7 The Cancer Genome Atlas Kidney Renal Clear Cell Carcinoma MDK 0.03 0.02 lasso 3 0.02 2.3e-03 6.1 -5.9 3.2e-09 -0.94 0.01 0.97 FALSE
8 The Cancer Genome Atlas Stomach Adenocarcinoma HARBI1 0.05 0.02 blup 12 0.02 1.5e-02 5.8 5.4 6.4e-08 0.96 0.01 0.76 FALSE