Best TWAS P=1.72e-08 · Best GWAS P=3.76e-09 conditioned to 0.0448
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | GTEx | Nerve Tibial | VPS29 | 0.05 | 0.01 | lasso | 4 | 0.00 | 2.5e-01 | -5.0 | -5.6 | 1.7e-08 | -0.87 | 0.01 | 0.87 | TRUE |
| 2 | YFS | Blood | ARPC3 | 0.06 | 0.04 | lasso | 4 | 0.05 | 7.9e-16 | -4.9 | 5.5 | 4.0e-08 | 0.82 | 0.18 | 0.82 | FALSE |