Best TWAS P=3.23e-08 · Best GWAS P=1.16e-07 conditioned to 0.818
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | GTEx | Nerve Tibial | CPEB1 | 0.09 | 0.04 | lasso | 3 | 0.05 | 0.00030 | 4.9 | -5.3 | 1.5e-07 | -0.87 | 0.04 | 0.96 | FALSE |
2 | GTEx | Thyroid | CPEB1 | 0.04 | 0.07 | lasso | 2 | 0.05 | 0.00012 | 4.9 | -5.4 | 7.9e-08 | -0.72 | 0.05 | 0.92 | FALSE |
3 | The Cancer Genome Atlas | Thyroid Carcinoma | CPEB1 | 0.03 | 0.02 | blup | 55 | 0.01 | 0.03200 | 5.2 | -5.5 | 3.2e-08 | -0.95 | 0.01 | 0.84 | TRUE |