Best TWAS P=1.02e-09 · Best GWAS P=1.36e-45 conditioned to 5.45e-34
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | CommonMind | Brain Pre-frontal Cortex | APOB | 0.13 | 0.12 | lasso | 2 | 0.12 | 1.0e-14 | 6.3 | -6.1 | 1.0e-09 | 0.30 | 1.00 | 0.00 | TRUE |
| 2 | METSIM | Adipose | HS1BP3 | 0.08 | 0.00 | bslmm | 536 | 0.02 | 2.8e-04 | -4.2 | 5.3 | 1.0e-07 | -0.34 | 0.09 | 0.30 | TRUE |
| 3 | YFS | Blood | HS1BP3 | 0.03 | 0.00 | blup | 536 | 0.01 | 3.7e-04 | -3.0 | 5.3 | 1.1e-07 | -0.02 | 0.62 | 0.01 | TRUE |