Best TWAS P=1.05e-07 · Best GWAS P=5.03e-07 conditioned to 0.38
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | GTEx | Esophagus Muscularis | TMEM161B-AS1 | 0.19 | 0.04 | lasso | 9 | 0.02 | 0.019 | 4.8 | 5.1 | 3.1e-07 | 0.90 | 0.04 | 0.93 | FALSE |
2 | GTEx | Testis | TMEM161B-AS1 | 0.17 | 0.00 | lasso | 5 | 0.00 | 0.632 | 4.8 | 5.3 | 1.1e-07 | 0.86 | 0.03 | 0.66 | TRUE |