TWAS
hub
About
Usage
Models
Genes
Traits
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Traits
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Number of treatments/medications taken
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chr1:109,126,153-110,517,617
Best TWAS P=7.47e-08 · Best GWAS P=1.55e-07 conditioned to 0.436
109.2M
109.4M
109.6M
109.8M
110M
110.2M
110.4M
110.6M
0
2
4
6
physical position
-log10 P
Marginal
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
2
The Cancer Genome Atlas
Liver Hepatocellular Carcinoma
SORT1
0.23
0.16
lasso
4
0.16
4.6e-08
-5.1
-5.4
7.5e-08
0.92
0.01
0.99
TRUE
1
GTEx
Esophagus Mucosa
PSRC1
0.18
0.14
lasso
3
0.14
2.4e-09
-4.8
-5.2
2.4e-07
0.95
0.01
0.98
FALSE