Best TWAS P=2.7e-08 · Best GWAS P=1.16e-06 conditioned to 0.123
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | GTEx | Nerve Tibial | PMS2P5 | 0.16 | 0.04 | enet | 34 | 0.08 | 3.5e-06 | 3.5 | -5.6 | 2.7e-08 | -0.67 | 0.02 | 0.92 | TRUE |
| 2 | GTEx | Nerve Tibial | STAG3L2 | 0.36 | 0.09 | enet | 13 | 0.24 | 9.5e-17 | 3.5 | -5.5 | 3.2e-08 | -0.75 | 0.08 | 0.83 | FALSE |
| 3 | GTEx | Skin Sun Exposed Lower leg | STAG3L2 | 0.15 | 0.05 | enet | 8 | 0.08 | 2.8e-07 | 3.5 | -5.1 | 2.9e-07 | -0.72 | 0.14 | 0.32 | FALSE |