[Hub]/) : Traits : Alcohol intake frequency. :

chr4:2,389,800-3,943,984

Best TWAS P=1.48e-09 · Best GWAS P=8.58e-11 conditioned to 0.000524

Associated models

# Study Tissue Gene h2 eQTL R2 model # weights model R2 model R2 P eQTL GWAS Z TWAS Z TWAS P Top SNP corr PP3 PP4 joint
1 GTEx Muscle Skeletal HTT 0.22 0.02 lasso 9 0.06 1.3e-06 -5.3 -5.4 8.0e-08 -0.61 0.44 0.42 FALSE
2 The Cancer Genome Atlas Kidney Renal Clear Cell Carcinoma C4orf44 0.03 0.02 blup 42 0.02 8.0e-04 -4.6 6.0 1.5e-09 0.63 0.27 0.25 TRUE
3 The Cancer Genome Atlas Lung Adenocarcinoma C4orf44 0.03 0.04 lasso 4 0.05 2.9e-06 -4.6 5.6 2.1e-08 0.62 0.52 0.41 FALSE
4 The Cancer Genome Atlas Lung Squamous Cell Carcinoma C4orf44 0.03 0.04 lasso 1 0.03 1.0e-04 -5.2 5.2 2.5e-07 0.34 0.36 0.56 FALSE
5 The Cancer Genome Atlas Thyroid Carcinoma C4orf44 0.15 0.20 lasso 4 0.20 2.9e-19 -5.1 5.2 1.9e-07 0.41 0.50 0.50 FALSE