Best TWAS P=1.93e-07 · Best GWAS P=1.41e-07 conditioned to 1
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | CommonMind | Brain Pre-frontal Cortex | ACVR2B | 0.08 | 0.08 | enet | 15 | 0.09 | 9.6e-11 | 5 | -5.2 | 1.9e-07 | -0.97 | 0.02 | 0.97 | TRUE |
2 | NTR | Blood | EXOG | 0.02 | 0.03 | lasso | 6 | 0.03 | 1.0e-09 | 5 | -5.2 | 2.3e-07 | -0.97 | 0.02 | 0.98 | FALSE |