Best TWAS P=3.48e-08 · Best GWAS P=4.12e-12 conditioned to 4.52e-06
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | The Cancer Genome Atlas | Soft Tissue Sarcoma | FOXP1 | 0.17 | 0.09 | lasso | 5 | 0.06 | 3e-04 | -5.7 | 5.5 | 3.5e-08 | -0.58 | 0.34 | 0.07 | TRUE |