Best TWAS P=3.11e-08 · Best GWAS P=4.45e-13 conditioned to 1.71e-06
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | GTEx | Vagina | C11orf24 | 0.24 | 0.04 | lasso | 9 | 0.08 | 5.8e-03 | -0.89 | 5.5 | 3.1e-08 | -0.65 | 0.04 | 0.51 | TRUE |
| 2 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | SAPS3 | 0.04 | 0.02 | blup | 84 | 0.04 | 2.5e-05 | -6.27 | 5.5 | 3.2e-08 | -0.86 | 0.17 | 0.83 | FALSE |