Best TWAS P=6.22e-10 · Best GWAS P=7.75e-10 conditioned to 1
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | GTEx | Artery Tibial | PCNA | 0.18 | 0.12 | lasso | 2 | 0.11 | 8.5e-09 | -6 | 6.2 | 6.2e-10 | -0.98 | 0 | 1 | TRUE |
2 | GTEx | Nerve Tibial | PCNA | 0.20 | 0.12 | lasso | 5 | 0.11 | 6.4e-08 | -6 | 5.9 | 2.8e-09 | -1.00 | 0 | 1 | FALSE |