TWAS
hub
About
Usage
Models
Genes
Traits
[Hub]/) :
Traits
:
Comparative height size at age 10
:
←
→
chr5:32,015,725-34,157,278
Best TWAS P=6.68e-10 · Best GWAS P=7.92e-29 conditioned to 1.42e-22
32M
32.5M
33M
33.5M
34M
0
5
10
15
20
25
30
physical position
-log10 P
Conditional
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
2
ROSMAP
Brain Pre-frontal Cortex
TARS
0.10
0.05
lasso
6
0.08
3.7e-10
-4.7
6.2
6.7e-10
0.10
0.99
0.00
TRUE
1
CommonMind
Brain Pre-frontal Cortex
NPR3
0.07
0.02
bslmm
470
0.02
2.2e-03
-5.1
5.5
3.5e-08
0.18
0.17
0.03
TRUE