Best TWAS P=2.86e-08 · Best GWAS P=7.87e-08 conditioned to 0.128
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | METSIM | Adipose | CMTR2 | 0.04 | 0.01 | bslmm | 275 | 0.02 | 0.00141 | -3.3 | -5.5 | 2.9e-08 | -0.80 | 0.02 | 0.98 | TRUE |
2 | The Cancer Genome Atlas | Stomach Adenocarcinoma | FTSJD1 | 0.05 | 0.03 | enet | 3 | 0.04 | 0.00034 | 5.1 | -5.2 | 1.6e-07 | -0.93 | 0.01 | 0.94 | FALSE |