Best TWAS P=1.29e-07 · Best GWAS P=1.27e-07 conditioned to 1
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | GTEx | Esophagus Mucosa | PRKACA | 0.23 | 0.27 | lasso | 6 | 0.24 | 2.4e-16 | -5.2 | -5.3 | 1.3e-07 | 0.99 | 0.01 | 0.99 | TRUE |
2 | GTEx | Spleen | CTB-55O6.12 | 0.36 | 0.14 | lasso | 5 | 0.11 | 1.1e-03 | -4.6 | 5.2 | 1.5e-07 | -0.89 | 0.03 | 0.85 | FALSE |