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Traits
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Breast cancer (self-reported)
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chr5:44,129,083-45,516,364
Best TWAS P=1.48e-09 · Best GWAS P=3.51e-08 conditioned to 0.327
44.2M
44.4M
44.6M
44.8M
45M
45.2M
45.4M
0
2
4
6
physical position
-log10 P
Marginal
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
3
GTEx
Spleen
RP11-53O19.3
0.26
0.13
enet
12
0.06
1.2e-02
4.7
-6.0
1.5e-09
-0.82
0.12
0.5
TRUE
1
GTEx
Lung
RP11-53O19.3
0.04
0.04
enet
8
0.05
7.8e-05
4.4
-5.8
8.5e-09
-0.77
0.11
0.8
FALSE
2
GTEx
Skin Not Sun Exposed Suprapubic
RP11-53O19.3
0.05
0.07
lasso
2
0.04
3.6e-03
5.4
-5.4
6.5e-08
-0.97
0.02
0.9
FALSE