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chr2:241,978,472-243,048,760

Best TWAS P=3.77e-09 · Best GWAS P=1.32e-08 conditioned to 0.793

Associated models

# Study Tissue Gene h2 eQTL R2 model # weights model R2 model R2 P eQTL GWAS Z TWAS Z TWAS P Top SNP corr PP3 PP4 joint
1 CommonMind Brain Pre-frontal Cortex D2HGDH 0.29 0.12 enet 6 0.14 1.2e-16 -5.7 5.9 3.8e-09 -0.92 0.00 1.00 TRUE
2 GTEx Adipose Subcutaneous AC114730.7 0.42 0.24 lasso 6 0.22 4.9e-18 5.0 5.1 2.9e-07 -0.81 0.04 0.96 FALSE
3 GTEx Brain Cerebellar Hemisphere AC114730.7 0.54 0.37 lasso 2 0.36 3.5e-10 4.8 5.2 2.2e-07 -0.85 0.06 0.94 FALSE
4 GTEx Brain Frontal Cortex BA9 D2HGDH 0.42 0.23 lasso 4 0.26 1.7e-07 4.8 5.4 5.2e-08 -0.90 0.01 0.98 FALSE
5 GTEx Brain Hypothalamus AC114730.7 0.55 0.21 enet 17 0.22 8.6e-06 4.8 5.1 2.6e-07 -0.73 0.06 0.79 FALSE
6 GTEx Breast Mammary Tissue (Male) D2HGDH 0.43 0.24 lasso 6 0.20 1.9e-05 5.0 5.5 3.8e-08 -0.83 0.02 0.90 FALSE
7 GTEx Breast Mammary Tissue (Male) AC114730.7 0.30 0.17 lasso 3 0.20 2.8e-05 5.0 5.5 3.4e-08 -0.88 0.01 0.92 FALSE
8 GTEx Cells Transformed fibroblasts D2HGDH 0.44 0.27 lasso 11 0.30 1.2e-22 4.8 5.5 4.2e-08 -0.86 0.08 0.91 FALSE
9 GTEx Cells Transformed fibroblasts AC114730.8 0.32 0.12 lasso 4 0.16 4.5e-12 4.8 5.7 1.5e-08 -0.89 0.01 0.99 FALSE
10 GTEx Colon Transverse D2HGDH 0.48 0.27 lasso 4 0.25 2.8e-12 4.8 5.2 2.1e-07 -0.80 0.05 0.94 FALSE
11 GTEx Esophagus Mucosa AC114730.7 0.31 0.18 enet 6 0.18 2.3e-12 5.0 5.2 1.7e-07 -0.81 0.06 0.94 FALSE
12 GTEx Muscle Skeletal D2HGDH 0.26 0.11 lasso 2 0.14 3.0e-13 -5.7 5.7 1.3e-08 -0.94 0.00 1.00 FALSE
13 GTEx Pancreas D2HGDH 0.48 0.32 lasso 11 0.31 1.4e-13 5.0 5.4 7.7e-08 -0.74 0.04 0.95 FALSE
14 GTEx Pancreas AC114730.8 0.20 0.15 lasso 3 0.14 1.7e-06 5.0 5.2 1.6e-07 -0.73 0.03 0.90 FALSE
15 GTEx Testis AC114730.8 0.18 0.04 enet 57 0.03 2.1e-02 5.0 5.2 2.0e-07 -0.45 0.01 0.87 FALSE
16 GTEx Uterus AC093642.3 0.35 -0.01 enet 25 0.07 1.8e-02 -3.0 -5.6 2.6e-08 0.46 0.02 0.26 TRUE
17 GTEx Whole Blood D2HGDH 0.12 0.08 lasso 3 0.08 5.7e-08 4.8 5.1 2.9e-07 -0.81 0.05 0.95 FALSE
18 GTEx Whole Blood AC114730.7 0.11 0.08 lasso 3 0.08 4.1e-08 5.0 5.2 1.9e-07 -0.80 0.04 0.96 FALSE
19 METSIM Adipose PDCD1 0.05 0.00 blup 171 0.02 1.9e-03 -5.7 -5.3 1.4e-07 0.44 0.00 0.91 FALSE
20 ROSMAP Brain Pre-frontal Cortex D2HGDH 0.44 0.33 lasso 6 0.35 2.1e-46 4.8 5.4 5.6e-08 -0.74 0.09 0.90 FALSE
21 The Cancer Genome Atlas Lung Squamous Cell Carcinoma D2HGDH 0.06 0.02 blup 28 0.04 1.3e-05 -5.7 5.4 5.4e-08 -0.86 0.00 1.00 FALSE