[Hub]/) : Traits : Sitting height :

chr9:115,476,640-116,888,067

Best TWAS P=5.11e-08 · Best GWAS P=6.03e-08 conditioned to 0.374

Associated models

# Study Tissue Gene h2 eQTL R2 model # weights model R2 model R2 P eQTL GWAS Z TWAS Z TWAS P Top SNP corr PP3 PP4 joint
1 GTEx Adipose Subcutaneous C9orf43 0.06 0.05 lasso 3 0.05 9.0e-05 -5.0 5.3 9.8e-08 -0.88 0.04 0.95 FALSE
2 GTEx Adipose Visceral Omentum C9orf43 0.12 0.08 lasso 10 0.06 3.0e-04 -5.3 5.3 1.3e-07 -0.98 0.03 0.96 FALSE
3 GTEx Cells EBV-transformed lymphocytes C9orf43 0.20 0.21 lasso 2 0.18 2.4e-06 -5.4 5.4 8.2e-08 -1.00 0.03 0.97 FALSE
4 GTEx Esophagus Mucosa C9orf43 0.13 0.13 lasso 4 0.12 1.4e-08 -5.4 5.4 5.9e-08 -1.00 0.03 0.97 FALSE
5 METSIM Adipose C9orf43 0.05 0.05 lasso 1 0.03 5.8e-06 -5.3 5.3 9.6e-08 -0.98 0.04 0.96 FALSE
6 The Cancer Genome Atlas Bladder Urothelial Carcinoma C9orf43 0.10 0.12 lasso 1 0.12 2.0e-10 -5.3 5.3 1.5e-07 -0.96 0.00 1.00 FALSE
7 The Cancer Genome Atlas Breast Invasive Carcinoma C9orf43 0.08 0.10 lasso 3 0.10 2.5e-20 -5.3 5.3 8.6e-08 -0.97 0.00 1.00 FALSE
8 The Cancer Genome Atlas Head and Neck Squamous Cell Carcinoma C9orf43 0.12 0.13 lasso 2 0.13 5.2e-14 -5.3 5.3 1.3e-07 -0.98 0.00 1.00 FALSE
9 The Cancer Genome Atlas Kidney Renal Clear Cell Carcinoma C9orf43 0.09 0.10 lasso 2 0.09 5.9e-10 -5.3 5.3 1.1e-07 -0.98 0.00 1.00 FALSE
10 The Cancer Genome Atlas Kidney Renal Papillary Cell Carcinoma C9orf43 0.13 0.08 blup 57 0.07 4.9e-05 -5.3 5.2 2.4e-07 -0.85 0.00 0.99 FALSE
11 The Cancer Genome Atlas Lung Adenocarcinoma C9orf43 0.12 0.16 enet 5 0.16 6.9e-18 -5.3 5.1 2.8e-07 -0.98 0.00 1.00 FALSE
12 The Cancer Genome Atlas Lung Squamous Cell Carcinoma C9orf43 0.21 0.19 blup 58 0.19 7.5e-21 -5.3 5.1 3.0e-07 -0.92 0.00 1.00 FALSE
13 The Cancer Genome Atlas Ovarian Serous Cystadenocarcinoma C9orf43 0.11 0.08 lasso 5 0.06 3.8e-05 -5.3 5.3 1.3e-07 -0.96 0.00 1.00 FALSE
14 The Cancer Genome Atlas Pheochromocytoma and Paraganglioma C9orf43 0.26 0.26 lasso 4 0.23 1.0e-09 -5.3 5.4 8.4e-08 -0.96 0.00 1.00 FALSE
15 The Cancer Genome Atlas Prostate Adenocarcinoma C9orf43 0.18 0.24 enet 6 0.24 4.3e-25 -5.3 5.4 6.3e-08 -0.98 0.00 1.00 FALSE
16 The Cancer Genome Atlas Rectum Adenocarcinoma C9orf43 0.49 0.17 enet 6 0.14 4.7e-04 -5.3 5.1 2.9e-07 -0.98 0.00 0.91 FALSE
17 The Cancer Genome Atlas Soft Tissue Sarcoma C9orf43 0.11 0.10 lasso 5 0.09 4.9e-06 -5.3 5.3 1.2e-07 -0.99 0.00 0.99 FALSE
18 The Cancer Genome Atlas Stomach Adenocarcinoma C9orf43 0.11 0.06 lasso 5 0.05 1.7e-04 -5.3 5.5 5.1e-08 -0.94 0.00 0.99 TRUE
19 The Cancer Genome Atlas Testicular Germ Cell Tumors C9orf43 0.13 0.15 enet 6 0.13 2.3e-05 -5.3 5.4 7.7e-08 -0.97 0.00 0.98 FALSE
20 The Cancer Genome Atlas Thyroid Carcinoma C9orf43 0.13 0.11 blup 57 0.16 3.7e-15 -4.8 5.2 2.7e-07 -0.85 0.01 0.98 FALSE