Best TWAS P=1.52e-07 · Best GWAS P=1.56e-07 conditioned to 1
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | GTEx | Testis | WDR78 | 0.45 | 0.42 | lasso | 6 | 0.40 | 5.0e-19 | 5.2 | 5.2 | 2.4e-07 | 1.00 | 0.02 | 0.98 | FALSE |
2 | GTEx | Thyroid | WDR78 | 0.12 | 0.11 | lasso | 3 | 0.09 | 2.4e-07 | 5.3 | -5.2 | 1.5e-07 | -0.98 | 0.02 | 0.98 | TRUE |