Best TWAS P=1.36e-07 · Best GWAS P=4.19e-07 conditioned to 0.415
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | GTEx | Lung | STX16-NPEPL1 | 0.15 | 0.07 | lasso | 4 | 0.09 | 3.6e-07 | -4.6 | 5.3 | 1.4e-07 | -0.89 | 0.01 | 0.99 | TRUE |
| 2 | GTEx | Spleen | STX16-NPEPL1 | 0.31 | 0.04 | enet | 15 | 0.08 | 5.0e-03 | 4.3 | 5.2 | 2.0e-07 | -0.66 | 0.03 | 0.76 | FALSE |
| 3 | GTEx | Whole Blood | STX16-NPEPL1 | 0.17 | 0.05 | enet | 33 | 0.09 | 1.4e-08 | 3.8 | 5.3 | 1.4e-07 | -0.61 | 0.06 | 0.89 | FALSE |