Best TWAS P=7.34e-11 · Best GWAS P=8.43e-13 conditioned to 0.00935
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | GTEx | Artery Aorta | CTB-36H16.2 | 0.12 | 0.15 | lasso | 3 | 0.12 | 2.6e-07 | -5.5 | 5.6 | 2.1e-08 | -0.05 | 0.01 | 0.99 | TRUE |
2 | The Cancer Genome Atlas | Prostate Adenocarcinoma | CEP120 | 0.10 | 0.14 | blup | 70 | 0.14 | 2.6e-14 | -7.0 | 6.5 | 7.3e-11 | -0.83 | 0.01 | 0.99 | TRUE |