TWAS
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Traits
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Traits
:
Forced expiratory volume in 1-second (FEV1), Best measure
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chr10:76,664,253-79,018,276
Best TWAS P=2.3e-12 · Best GWAS P=2.27e-16 conditioned to 1.15e-05
77M
77.5M
78M
78.5M
79M
0
5
10
15
physical position
-log10 P
Conditional
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
2
GTEx
Brain Cortex
C10orf11
0.32
0.15
lasso
8
0.21
1.4e-06
6.5
-7.0
2.3e-12
0.77
0.36
0.58
TRUE
4
GTEx
Muscle Skeletal
C10orf11
0.11
0.13
lasso
3
0.12
5.1e-12
6.5
-6.9
4.3e-12
0.73
1.00
0.00
FALSE
5
ROSMAP
Brain Pre-frontal Cortex
C10orf11
0.20
0.23
lasso
4
0.23
1.1e-29
6.5
-6.6
3.6e-11
0.69
1.00
0.00
FALSE
1
GTEx
Brain Caudate basal ganglia
C10orf11
0.35
0.27
lasso
4
0.25
9.8e-08
6.4
-6.5
9.4e-11
0.69
0.73
0.21
FALSE
3
GTEx
Brain Frontal Cortex BA9
C10orf11
0.33
0.18
enet
11
0.19
9.3e-06
6.4
-6.4
2.2e-10
0.70
0.52
0.30
FALSE