TWAS
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Traits
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Traits
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Forced expiratory volume in 1-second (FEV1), Best measure
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chr15:73,524,629-74,915,888
Best TWAS P=4.38e-10 · Best GWAS P=5.66e-17 conditioned to 5.76e-09
73.6M
73.8M
74M
74.2M
74.4M
74.6M
74.8M
0
5
10
15
physical position
-log10 P
Conditional
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
3
GTEx
Testis
LOXL1-AS1
0.36
0.15
lasso
10
0.13
2.4e-06
-6.0
-6.2
4.4e-10
0.58
0.51
0.08
TRUE
4
GTEx
Thyroid
LOXL1-AS1
0.15
0.03
enet
40
0.03
2.6e-03
-6.0
6.2
4.9e-10
-0.33
0.12
0.24
FALSE
1
GTEx
Cells Transformed fibroblasts
LOXL1-AS1
0.28
0.09
lasso
6
0.17
1.7e-12
3.0
5.4
7.2e-08
-0.64
0.99
0.01
FALSE
2
GTEx
Skin Sun Exposed Lower leg
LOXL1-AS1
0.11
0.05
enet
11
0.10
7.3e-09
1.7
5.4
8.1e-08
-0.41
0.83
0.07
FALSE